3D Intensity quantification

This plugin will compute the basic statistics about objects intensity quantification.

The plugin will require two images as input, the first image will contain the objects inside which to perform intensity measurement, the other one will contain the signal to be quantified. The objects image can be a binary or labelled image, in case of a binary image, a labelling will be performed.

The values in the results table are :

• Label: the name of the image
• Value: the pixel value of the object in the labelled image
• Average: the mean value of the signal inside the object
• Minimum: the minimum value of the signal inside the object
• Maximum: the maximum value of the signal inside the object
• StandardDeviation: the standard deviation of the values of the signal inside the object
• IntegratedDensity: the sum of value of the values of the signal inside the object
• Channel: the channel number of the image
• Frame: the frame number of the image