3D Simple segmentation and labelling

This plugin will threshold and label an image with bright objects over a dark background, it can also be used on an already thresholded image to detect and label objects in 3D.

The low threshold parameter is used for thresholding, if the image is already thresholded used the default value 128 (in the thresholded image, background pixels should have a value of 0, and objects pixels 255.

The plugin can also discard small or large objects using the parameters min size and max size. These sizes refer to pixels number, use default value -1 not to put a limit on maximum size.

In case objects are only one pixel size objects, select the individual voxels option, each voxel will be a different object. In case you are expecting more than 65,535 objects, use the 32-bit segmentation option to create a 32-bit segmentation image.