3D Centroid quantification

This plugin will compute the centroid (geometrical centre) coordinates of the objects.

The plugin will require one images as input, the will contain the objects to measure. The objects image can be a binary or labelled image, in case of a binary image, a labelling will be performed.

The values in the results table are :

  • Label: the name of the image
  • Value: the pixel value of the object in the labelled image
  • CX(pix): the coordinate X of the centroid of the object
  • CY(pix): the coordinate Y of the centroid of the object
  • CZ(pix): the coordinate Z of the centroid of the object
  • Channel: the channel number of the image
  • Frame: the frame number of the image